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Bioinformatics
Biological informatics (bioinformatics) concerns the analysis and interpretation of various types of data including nucleotide and amino acid sequences, protein domains, and protein structures.  Informatics helps us to understand and organize different types of information, and to see patterns in the information. A wide variety of software and hardware applications are utilized in the analysis and interpretation of informatics data.  For example, the alignment below was produced using ClustalW from EBI and visualized using a new program called JalView.

MSA Using ClustalW of Homologues to Intermediate Filament Sequences in Xenopus

Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M. and Barton, G. J. (2009) "Jalview Version 2 - a multiple sequence alignment editor and analysis workbench" Bioinformatics doi: 10.1093/bioinformatics/btp033

Please direct any comments or questions regarding the Bioinformatics Core to riinbre@etal.uri.edu.

IT Coordinator:
Clinton Chichester, Ph.D.
125 Fogarty Hall

College of Pharmacy

41 Lower College Road

Kingston, RI  02881

Phone: 401-874-5034

Fax: 401-874-2646
Email: chichester@uri.edu

 

Bioinformatics Core Coordinator:
Joanna Fueyo, Ph.D.
348 Fogarty Hall

College of Pharmacy

41 Lower College Road

Kingston, RI  02881

Phone: 401-874-5037

Fax: 401-874-2646
Email: joanna_fueyo@mail.uri.edu

 

News & Events

RI-INBRE Newsletter Fall 2009

RI-INBRE Newsletter Fall 2009

Grant Workshop PowerPoint Presentations & Handouts

Balancing Teaching and Research at PUIs


Components of a Successful AREA (R15) Grant


NSF-RUI Program: Strategies and Tips for Success


Handouts

Important Dates

RI-INBRE Calendar


12/3//09 - Shahram Khademi, Ph.D, University of Iowa - "The structure and mechanism of ammonia channels"


12/4/09 - 4th Annual BioNES Meeting, Roger Williams University, Bristol, RI


1/29/10 - RI-INBRE Research Fellows Meeting & Faculty Retreat, Providence College, Providence, RI


3/1/10 - Application Deadline for the 2010 Summer Undergraduate Research Fellowships


6/16/10 - 6/18/10 National IDeA Symposium of Biomedical Research Excellence, Bethesda, MD

 Supported by grant #  P20RR016457 from:

 

 

Contact Info
Contact RI INBRE:  
University of Rhode Island
Fogarty Hall
| 41 Lower College Rd | Kingston, RI 02881
Phone: (401) 874-9288 | Fax: (401) 874-2646 | E-mail: riinbre@etal.uri.edu