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Thomas Meedel

Experimental Test of the Myogenic Code Hypothesis (2012 - Present)

Investigator:  Thomas Meedel, Rhode Island College

Abstract:  The objective of this project is to determine whether the alanine-threonine (Ala-Thr) dipeptide found in all Myogenic Regulatory Factor (MRF) genes and known as the "Myogenic Code", is essential for their activity. MRFs exist in animals ranging from worms to humans, and they are typically active only in muscle or muscle precursor cells where they play key roles in myogenesis. MRF genes have also been shown to be involved in muscle repair and regeneration following injury or disuse, and to play significant roles in certain muscle abnormalities and disease states. Thus their study has clear implications for issues of human health. This project use~ embryos -of the ascidian Ciona intestinalis as a simple in vivo test system to investigate the properties of MRF genes. We have two goals. The first is to determine whether the Ala-Thr dipeptide, which is known to be critical for the activity of vertebrate MRFs, is also important for the myogenic activity of invertebrate MRF genes. We will do this by making MRF proteins with mutations in this dipeptide and then assaying the mutant proteins for the ability to stimulate muscle development in non-muscle cells of Ciona embryos; previously we showed that normal (i.e. non-mutant) MRFs stimulated muscle development in this assay. Our second goal is to determine whether a potential MRF of jellyfish - a primitive invertebrate - can direct muscle development in our assay. A positive result would provide strong evidence that this gene encodes an authentic MRF, which would indicate an extremely ancient origin for this gene family. Assuming the jellyfish gene is myogenic, we would then determine whether the Ala-Thr dipeptide it possess is required for function. In all experiments, highly specific markers of muscle development and differentiation are used to analyze experimental outcomes. In addition to providing insight into the fundamental properties of the MRF gene family all experimental procedures needed for this project can be carried out by undergraduate students thereby providing opportunities for their full participation in meaningful scientific research. 

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3/22/2013 - "Revealing Nonobvious Features in Noncoding Human DNA - Insights for Evolution, Gene Expression and Disease" by Laura Elnitski, Ph.D., National Human Genome Institute, National Institutes of Health


8/14/2013-8/16/2013 - 5th Northeast Regional IDeA Meeting, University of Delaware, Newark, DE


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Supported by grant # 8P20GM103430-12 from the National Institute of General Medical Sciences of the National Institutes of Health.
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University of Rhode Island
495J, College of Pharmacy
| 7 Greenhouse Road | Kingston, RI 02881
Phone: (401) 874-9288 | Fax: (401) 874-2646 | E-mail: riinbre@etal.uri.edu