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RI-INBRE > Research Core > Molecular Toxicology > Rebeka Merson

Rebeka Merson

Gene Divergence of Aryl Hydrocarbon Receptors (AHR) in Early Vertarates (2009 - Present)

Investigator:  Rebeka Merson, Rhode Island College
Mentor
:
  Mark Hahn, Woods Hole Oceanographic Institute 

Abstract:  Adverse health effects from exposure to dioxin-like compounds depend on activation of aryl hydrocarbon receptors (AHR), induction of genes encoding biotransformation enzymes, and dyregulation of numerous genes outside the toxic response pathway. AHR proteins have non-transcriptional roles in cell physiology in the absence and presence of AHR ligands. Thus, it is difficult to distinguish AHR-dependent toxic response mechanisms from the perturbation of endogenous function of AHR.

We study the divergence of function among multiple AHR paralogs in early vertebrates so we may separately test the pleiotropic functions of the single mammalian AHR. Our previous studies support that shark AHR paralogs diverge in function. In the proposed study, several undergraduate student projects are designed to assess the function of shark receptors in cell physiology and toxic responses to AHR agonists, and to investigate the genomic context of these early vertebrate AHR genes with a BAC library.  We aim to develop an effective paradigm to separately test hypotheses about subsets of mammalian AHR gene targets and non-transcriptional AHR protein function. Results from our research will provide information relevant to human physiology, development, and environmental health.

Specific subprojects include: Subcellular localization of AHR1, AHR2, AHR3 and response to AHR agonists using laser scanning confocal microscopy; Transactivation potential of AHR1, AHR2 isoforms, and AHR3; PCR confirmation of SaAHRs in BAC clones; Southern blotting of digested BAC clone DNA for subcloning partial genes; Determination Gene structure SaAHR genes. Projects will have a minimum duration of one semester and include training in molecular, genomic, and cellular methods as well as bioinformatics. Student participants will be encouraged to extend their research projects into honors theses. These projects will utilize the resources and staff expertise at the RI-INBRE Bioinformatics Core, the Rhode Island Genomics and Sequencing Center, genomics and cell resources generated at Mount Desert Island Biological Laboratory MDIBL (Maine INBRE), and foster research collaborations with researchers at Woods Hole Oceanographic Institution, and among INBRE Programs (URI/RIC & MDIBL).
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