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Gene Divergence of Aryl Hydrocarbon Receptors (AHR) in Early Vertarates (2009 - Present)
Investigator:
Rebeka Merson, Rhode Island College Mentor: Mark
Hahn, Woods Hole Oceanographic Institute
Abstract:
Adverse health
effects from exposure to dioxin-like compounds depend on activation of
aryl hydrocarbon receptors (AHR), induction of genes encoding
biotransformation enzymes, and dyregulation of numerous genes outside
the toxic response pathway. AHR proteins have non-transcriptional roles
in cell physiology in the absence and presence of AHR ligands. Thus, it
is difficult to distinguish AHR-dependent toxic response mechanisms from
the perturbation of endogenous function of AHR.
We study the divergence of
function among multiple AHR paralogs in early vertebrates so we may
separately test the pleiotropic functions of the single mammalian AHR. Our
previous studies support that shark AHR paralogs diverge in function. In
the proposed study, several undergraduate student projects are designed to
assess the function of shark receptors in cell physiology and toxic
responses to AHR agonists, and to investigate the genomic context of these
early vertebrate AHR genes with a BAC library. We aim to develop an
effective paradigm to separately test hypotheses about subsets of
mammalian AHR gene targets and non-transcriptional AHR protein function.
Results from our research will provide information relevant to human
physiology, development, and environmental health.
Specific subprojects
include: Subcellular localization of AHR1, AHR2, AHR3 and response to AHR
agonists using laser scanning confocal microscopy; Transactivation
potential of AHR1, AHR2 isoforms, and AHR3; PCR confirmation of SaAHRs in
BAC clones; Southern blotting of digested BAC clone DNA for subcloning
partial genes; Determination Gene structure SaAHR genes. Projects will
have a minimum duration of one semester and include training in molecular,
genomic, and cellular methods as well as bioinformatics. Student
participants will be encouraged to extend their research projects into
honors theses. These projects will utilize the resources and staff
expertise at the RI-INBRE Bioinformatics Core, the Rhode Island Genomics
and Sequencing Center, genomics and cell resources generated at Mount
Desert Island Biological Laboratory MDIBL (Maine INBRE), and foster
research collaborations with researchers at Woods Hole Oceanographic
Institution, and among INBRE Programs (URI/RIC & MDIBL). |