Faculty Publications Compiled by Margaret J. Keefe

Faculty Publications 2009

ENVIRONMENT & LIFE SCIENCES
Biological Sciences

Anthony, Anthony, Joshua  Atwood, Peter August, Carrie Byron, Sstanley Cobb, Cheryl Foster, Crystal Fry, Arthur Gold, Kifle. Hagos L. Heffner, D. Q. Kellogg, Kimberly Lellis-Dibble, James J. Opaluch, Candace Oviatt, Aanna Pfeiffer-Herbert, Nicole Rohr, Leslie Smith,  Tiffany Smythe, Judith Swift and Nathan Vinhateiro. "Coastal Lagoons and Climate Change: Ecological and Social Ramifications in the US Atlantic and Gulf Coast Ecosystems." Ecology and Society. 14(1):#8. June 2009..

Archibald, John M. and C.hristopherE. Lane. "Going, Going, Not Quite Gone: Nucleomorphs as a Case Study in Nuclear Genome Reduction." Journal of Heredity. 100(5):582-590. September-October 2009.

Bajec, Iztok Lebar and Frank H. Heppner. "Organized Flight in Birds." Animal Behaviour. 78(4):777-789. October 2009.

Barber, Julie and J. Stanley Cobb. "Qualitative Observations of Dungeness Crabs, Cancer Magister, in and Around Traps: Evidence of Resource Guarding and Clustering." Marine & Freshwater Behavior and  Physiology. 42(2):135-146. May 2009.

Bassett, Daniel K. and Jacqueline F. Webb. "Lateral Line-Mediated Prey Detection in the Lake Malawi Cichild, Aulonocara hansbaenchi (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E11. February 2009.

Batiuk, Richard A., Denise L. Breitburg, Robert J. Diaz, Thomas M. Cronin, David H. Secor and Glen Thursby. "Derivation of Habitat-Specific Dissolved Oxygen Criteria for Chesapeake Bay and Its Tidal Tributaries." Journal of Experimental Marine  Biology and Ecology. 381(suppl.1):S204-215. 1 December 2009.

Beatty, Michael, Rebekah Wigton, Robert Hill and Ying Sun. "The Rate Response and Synchronization of Muscle Contractions in the Forearms."  Proceedings of the IEEE 35th Annual Northeast Bioengineering Conference. 2009.

Blanchette, Mattnhew D. and Steven Q. Irvine. "Qualitative RT-PCR Analysis of Dd-B Knockdown in the Ascidian (Abstract)." Ciona Intestinalis. 331(2):432. 2009.

Camp, Ariel L., Nidai Konow and Christopher P. J. Sanford. "Functional Morphology and Biomechanics of the Tongue-Bite Apparatus in Salmonid and Osteoglossomorph Fishes." Journal of Anatomy. 214(5):717-728. May 2009.

Carlton, James and William Newman. "Reply to Clare and Hoeg 2008. Balanus amphritrite or Amphibalanus amphitrate: A Note on Barnacle Nomenclature." Biofouling. 25(1):77-80. 2009.

Carrington, Emily, Gretchen M. Moeser, ames. Dimont, Joseph J. Mello and Michael L. Boller. "Seasonal Disturbance to Mussel Beds: Field Test of a Mechanistic Model Predicting Wave Dislodgement." Limnology and Oceanography. 54(3):976-860. May 2009.

Cobb, J. Stanley.  SEE: Anthony, A.; Barber, Julie.

Codiga, Daniel L., Heather E. Stuffel, Christopher F. Deacutis, Susan Kieman and Candace A. Oviatt. "Narragansett Bay Hypoxic Event Characteristics Based on Fixed-Site Monitoring Network Time Series: Intermittancy, Geographic Distribution, Spatial Synchronicity, and Interannual." Estuaries and Coasts. 32(4):621-624.July  2009.

Deacutis, Christopher F.  SEE: Codiga, Daniel L.

Dunn, P. H., R. D. Goos and C. J. K. Wang. "Gladys Elizabeth Baker, 1908-2007." Mycologia. 101(3):431-435. May-June 2009.

Fitzpatrick, Matthew C., Evan L. Preisser, Aaron M. Ellison and Joseph S. Elkinton. "Observation Bias and the Detection of Low Density Populations." Ecological Applications. 19(7):1673-1679. October 2009.

Flammang, B. E. and G. V. Lauder. "Caudal Fin Shape  Modulation and Control During Acceleration, Braking and Backing Maneuvers in Bluegill Sunfish, Lepomis macrochhirus." Journal of Experimental Biology. 212(2):277-287. January 2009.

Goos, Roger D.  SEE: Dunn, P. H.

Goldsmith, Marian R.  SEE: Wu, C. C.; Zhen, Shuai.

Haciski, Sinsby and Jacqueline F. Webb. "Preliminary Observations on the Development of the Little Skate, Levcoraia erinacea, With reference to the Mechanosensory Lateral Line System (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E238. February 2009.

Heppner, Frank H.  SEE also: Bajec, Istok LeBar.

Heppner, Frank. "Introductory Biology: Let's Train Lecturers (Letter)." Science. 325(5946):1338. September 11, 2009.

Heppner, Frank. "Kingston Amtrak Station's Safety (Letter)." Providence Sunday Journal. February 1, 2009.

Heppner, Frank. "No Screening Birds (Letter)." Providence Journal. April 6, 2009.  p.B7.

Heppner, Frank. "On the Bottom Line, Good Teaching Tops Good Research." Chronicle of Higher Education. 55(27):A72. March 13, 2009.

Hill, Robert B.  SEE: Beatty, Michael; Opuszynski, Michael..

Howlett, Niall G.  SEE also: Rego, Meghan A.

Howlett, Niall G., Julie A. Hanley, Meghan A. Rego, Frederick W. Kolling and Thomas K. Glover. "Functional Interaction Between the Fanconi Anemia D2 Protein and Proliferating Cell Nuclear Antigen (PCNA) With a Conserved Potative PCNA Interaction Motif." Journal of Biological Chemistry. 284(42):28935-289422. October 16, 2009.

Irvine, Steven Q.  SEE also: Blanchette, Matthew D.

Irvine, Steven Q.  and Matthew D. Blanchette. "Fluorescence Activated Cell Sorting and Transgenic Reporters for Measuring Gene Expression Profiles in Embryonic Epidermis of the Ascidian Ciana Intestinalis  (Abstract)." Ciona Intestinalis. 331(2):529. July 15, 2009.

Kass-Simon, Gabriele.  SEE: Kay, J. G.

Kay, J. C. and G. Kass-Simon. "Glutamatergic Transmission in Hydra: NMDA/D-Serine Affects the Electrical Activity of the Body and Tentacles of Hydra vulgaris (Cnidaria hydrozoa)." Biological Bulletin. 216(2):113-125. April 2009.

Killingbeck, Keith T. "Flowers Are Produced on Stems Shorter Than One Meter in the Desert Shrub Ocotillo (Fouquieria splendens)." Southwestern Naturalist. 54(1):55-57. March, 2009.

Lane, Christopher E.  SEE also: Archibald, John M.

Lane, Christopher E. and John M. Archibald. "Reply to Bodyl, Stiller and Mackiewicz: 'Chromalveolata plastids: Direct Descent or Multiple Endosymbiosis (Letter)?'" Trends in Ecology and Evolution. 24(3):121-122. Lane 2009.

Lauder, George V.  SEE: Flammang, B. E.

Lyons, Patrick, Carol Thornber, John  Portnoy and Evan Gwilliam. "Dynamics of Macroalgal Blooms Along the Cape Cod National Seashore." Northeastern Naturalist. 16(1):53-66. 2009.

Opuszynski, Michael, Martin Amani, Robert Hill and Ying Sun. "A Face-Clamp System With Realistic Waveforms for Studying Auxotonic Contractions of Muscles."  Proceedings of the IEEE 35th Annual Northeast Bioengineering Conference. 2009.

Preisser, Evan L.  SEE also: Fitzpatrick, Matthew C.

Preisser, E. L. "The Physiology of Predator Stress in Free-Ranging Prey." Journal of Ecology. 78(6):1103-1105. November 2009.

Preisser, Evan L., Diane I. Bolnick and Jonathan H. Grabowski. "Resource Dynamics Influence the Strength of Non-Consumptive Predator Effects on Prey (Letter)." Ecology Letters. 12(4):316-323. April 2009.

Ramsay, J. B. and C. D. Wilga. "Jaw Depression Function During Feeding in Little Skates, Leucorajin erinacea (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E140. February 2009.

Rego, Meghan A., Frederick W. Kolling 4th and Niall G. Howlett. "The Fanconni Anemia Protein Interaction Network: Casting a Wide Net." Mutation Research. 668(1-2):27-41. July 31,  2009.

Roberts, Eric and Alison W. Roberts. "A Cellulose Synthase (CESA) Gene From the Red Alga Porphyra yezoensis (Rhodophyta)." Journal of Phycology. 45(1):203-212. February 2009.

Roberts, Alison W.  SEE: Roberts, Eric.

Rosa, Rui, Lloyd Trueblood and Brad A. Seibel. "Ecophysiological Influence on Scaling Aerobic and Anerobic Metabolism of Pelagic Gonatid Squids." Physiological and  Biochemical Zoology. 82(5):419-429. September 2009.

Rosenthal, Joshua J. C., Brad A. Seibel, Agnieszka Dymowska and Francisco Bezanilla. "Trade-Off Between Aerobic Capacity and Locomotor Capitation Activity in an Antarctic Pteropod."  Proceedings of the National Academy of the United States. 106(15):6192-6196. April 14, 2009.

Sanford, Christopher P. J.  SEE: Camp, Ariel L

Scott, A. J., S. P. Gerry, J. Ramsay and C. D. Wilga. "Condition of Muscle Activity Between Ventilation and Feeding in Spiny Dogfish (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E303. February 2009.

Seibel, Brad A.   SEE also: Rosa, Rui; Rosenthal, Joshua C.

Seibel, Brad A. and Heidi M. Dierssen. "Animal Function at the Heart (and Gut) of Oceanography." Science. 323(5912):343-344. January 16, 2009.

Stoehr, A. S. and C. D. Wilga. "Prey Processing in Elasmobranches (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E310. February 2009.

Thornber, Carol S.  SEE: Lyons, Patric; Tracy, M.

Thursby, Glen.  SEE: Batiuk, Richard M.

Tracy, M.,  B. Wysor, M. Guidone and C. Thornber. "A Molecular Comparison Drift and Attached Green Tide Species in Narragansett Bay, RI (Abstract)." Journal of Phycology. 45(S1):30. February 2009.

Twombly, Saran.  SEE: Wang, Guiming.

Wang, Guiming, N. Hobbs, Saran Twombly, Randall Boone, Andrew Illius, Iain Gordon and John Gross. "Density Dependence on Northern Ungulates: Interactions With Predation and Resources." Population Ecology. 51(1):123-132. 2009.

Webb, Jacqueline F.  SEE also: Bassett, Daniel K.; Haciski, Sinsby.

Webb, Jacqueline F. "Book Review: Atlas of Fish Histology." Quarterly Review of Biology. 84(3):313. September 2009.

Wilga, Cheryl D.  SEE also: Ramsay, J. B.; Scott, A. J.; Stoeha, A. S.; Wood, Anthony D.

Wilga, Cheryl D. "Hyoid and Pharyngeal Arch Function During Ventilation and Feedings in Elasmobranches (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E182. February 2009.

Wood, Anthony D., Bradley M. Wetherbee, Francis Juanes, Nancy E. Kohler and Cheryl Wilga. "Recalculated Diet and Dairy Ration of the Shortfin Mako (Isurus oxyrincvhus), With a Focus on Quantifying Predation on Bluefish (Pomatomus saltratrix) in the Northeast Atlantic Ocean." Fishery Bulletin. 107(1):76-88. January 2009.

Wu, C. C., D. Prostou, D. Carter, E. Nicholson, F. Santos, S. Y. Zhao, H. B. Zhang and M. R. Goldsmith. "Construction and Sequence Sampling of Deep-Coverage Large-Insect BAC Libraries for Three Model Lepidopteran Species." BMC Genomics. 10:#283. June 26, 2009.

Zhan, Shuai JianhuaHuang, Qiuhing Guo, Yunpo Zhao, Weihua Li, Xuexia Miao, Maian R. Goldsmith, Muwang Li and YongpingHuang. "An Integrated Genetic Linkage Map for Silkworm With Three Parental Combinations and Its Application to the Mapping of Single Genes and QTL." BMC Genomics. 10:389. August 21, 2009.

Bibb, Bullock, Costantino, Hyland, Koske

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