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University Libraries
Faculty Publications
Compiled by Margaret J. Keefe

Faculty Publications 2009

Fisheries, Animal & Veterinary Sciences

Aires-da-Silva, Alexandre. Mark, M. N. Maunder, Vincent F. Gallucci, Nancy E. Kohler and John J. Hoey. "A Spatially Structured Tagging Model to Estimate Movement and Fishing Mortality Rates for the Blue Shark (Prionance glauca) in the North Atlantic Ocean." Marine and Freshwater Research. 60(10):1029-1043. 2009.

Appledorn, R. S., G. D. Dennis, R. L. Hill, W. Merton, C. W. Recksiek and S. J. Williams. "Movement of Fishes (Grunts: Haemulidae) Across the Coral Reef Seascape: A Review of Scales, Patterns and Processes." Caribbean Journal of Science. 45(2-3):304-316. 2009.

Bengtson, David A.  SEE: Markey, K.

Bradley, Terence M.  SEE: Medeiros, E. F.

Brumbaugh, Robert D. and Loren D. Coen. "Contemporary Approaches for Small-Scale Oyster Reef Restoration to Address Substrate Versus Recruitment Limitation: A Review and Comments Relevant for the Olympia Oyster, Ostrea lurida Carpenter 1864." Journal of Shellfish Research. 28(1):147-173. March 2009.

Castro, Kathleen M.  See also: Shields, J.

Castro, K. "Recent Progress in the New England Shell Disease Initiative (Abstract)." Journal of Shellfish Research. 28(3):687-688 August 2009.

Committee on Best Practices for Shellfish Aquaculture and the Effects of Commercial Activities in Drakes Estero, Point Reyes National Seashore, California (Peterson, O., B. Costa-Pierce, B. Drumbauld, E. Hofmann, H. Kite-Powell, D. Manahan, F. O'Beirn, R. Paine, P. Thompson and R. Whitlach). Ocean Studies Board, National Academy of Sciences, Washington, D. C. 2009.

Costa-Pierce, Barry A.  SEE also: Committee..

Costa-Pierce, Barry A. "The Wonders of Sea Grant." Providence Sunday Journal. January 25, 2008.  p.D4.

DeAlteris, Joseph T.  SEE: LaValley, Kenneth J.; Reich, Danielle A.

de Freitas, Renato Hagenis Ache, Richard S. Rosa, Bradley M. Weatherbee and Samuel H. Gruber. "Population Size and Survivorship for Juvenile Lemon Sharks (Negaprion brevirostris) on Their Nursing Grounds at a Marine Protected Area in Brazil." Neotropical Icthyology. 7(2):205-212. April-June 2009.

Drinkwater, K. F., F. Mueter, K. D. Friedland, G. L. Hunt and J. Hare. "Recent Climate Forcing and Physical Oceanography Changes in Northern Hemisphere Regions: A Review and Comparison of Four Marine Ecosystems." Progress in Oceanography. 81(1-4):10-28. April 2009.

Dudzinski, Kathleen M., Jeanette A. Thomas and Justin D. Gregg. "Communication in Marine Mammals."   IN: William F. Perrin, Bernd Wursig and J. G. M. Thewissen, Editors. Encyclopedia of Marine Mammals. 2d ed. Academic Press. 2009.  p.260-269.

Dudzinski, Kathleen Marie, Justin David George, Christine Ann Ribic and Stan Abraham Kuczal. "A Comparison of Pectoral Fin Contact Between Two Different Wild Dolphin Populations." Behavioural Processes. 80(2):182-190. February 2009.

DeFavier, J., R. M. Smolowitz and S. B. Roberts. "Development and Validation of a Real-Time Quantitative PCR Assay for the Detection and Quantification of Perkinsus marinus in the Eastern Oyster, Crassostrea virginica." Journal of Shellfish Research. 28(3):459-464. August 2009.

Fogarty, Michael J.  SEE also: Levin, Phillip. S.; Palumbi, Stephen R.; Worm, Boris.

Fogarty, Michael J.  Dynamics of Exploited Marine Fish Populations."  IN: Encyclopedia of Ocean Sciences. 2nd ed. 2009.  p.774-781.

Fogarty, Michael J. and J. S. Collie. "Fisheries Overview."  IN: Encyclopedia of Ocean Sciences. 2nd ed. 2009.  p.3722-3777.

Friedland, Kevin G., Jonathan A. Hare, Grayson B. Wood, Laurel A. Col, Lawrence Buckley, David Mountain, Joseph Kane, Jon Brodziak, R. Gregory Lough and Cynthia Pilskaln. "Reply to Comment by Payne et al. on 'Does the Fall Phytoplankton Bloom Control Recruitment of Georges Bank Haddock, Melanogrammus aeglefish, Through Parental Condition?' Canadian Journal of Fisheries and Aquatic Sciences. 66(5):873-877. May 2008.

Gedamke, Todd, John M. Hoening, William D. DuPau and John A. Musick. "Stock-Recruitment Dynamics and the Maximum Population Growth Rate of the Barndoor Skate on Georges Bank." North American Journal of Fisheries Management. 29(2):512-526. April 2009.

Gomez-Chiarri, Marta.  SEE: LaValley, Kenneth J.; Markey, K.;  McGreevy, Thomas J., Jr.; Nacci, Diane; Proestou, D. A.; Shelton, J.; Vaughn, C. F.

Hansen, H. and M. L. Schwartz. "Fine Structure of Picment Cup Ocelli in Micrura verrilli (Nemertea) (Abstract)." Integrative and Comparative Biology. 49(Suppl.1):E240. 1 February 2009.

Hare, Jonathan A.  SEE: Drinjkwater, K. F.; Friedland, Kevin G.; Hernandez, Frank J.;  Link, Jason; Megrey, Bernard A.; Mueter, Franz J.; Wood, Abby Jane M.

Hernandez, Frank J., Jonathan A. Hare and Dariusz P. Fay. "Evaluating Diel, Otogenic and Environmental Effects on  Larval Fish Vertical Distribution Using Generalized Addictive Models for Location, Scale and Shape." Fisheries Oceanography.  18(4):224-236. 2009.

Hoey, John J.  SEE: Aires-da-Silva, Alexandre M.

LaValley, Kenneth J., Steve Jones, Marta Gomez-Chiarri, Joseph DeAlteris and Michael Rice. "Bacterial Community Profiling of the Eastern Oyster (Crassostorea virginica): Comparison of Culture-Dependent and Culture-Independent Outcomes." Journal of Shellfish Research. 28(4):827-835. December 2009.

Leavitt, Dale F.  SEE: Markey, K.;  Rice, Michael A.

Levin, Phillip S., Michael J. Fogarty, Steven A. Murawski and David Fluharty. "Integrated Ecosystem Assessments: Developing the Scientific Basis for Ecosystem-Based Management of the Ocean." Plos Biology. 7(1):23-28. January 2009.

Link, Jason, William T. Stockhausen, Georg Skaret, William Overholtz, Bernard A. Megrey, Harold Gjosater, Sarah Gaichas, Are Dommasner, Jannike Falk-Peterson, Jioseph Kane, Franz J. Mueter, Kevin D. Friedland and Jonathan L. Hare. "A Comparison of Biological Trends From Four Marine Ecosystems: Synchrones, Differences, and Commonalities." Progress in Oceanography. 81(1-4):29-46. April 2009.

Mansfield, Katherine L., Vincent S. Saba, John A. Keinath and John A. Musick. "Satellite Tracking Reveals a Dichotomy in Migration Strategies Among Juvenile Loggerhead Turtles in the Northwest Atlantic." Marine Biology. 156(12):2555-2570. November 2009.

Markey, K., D. Bengtson, M. Gomez-Chiarri, D. Leavitt, A. Lipsky and E. Scherer. "Environment and Disease Monitoring of Rhode Island Shellfish Farms Through the EQIP Program 2006-2008 (Abstract)." Journal of Shellfish Research. 28(3):653. August 2009.

Markey, K., D. Leavitt, K. Tamm and M. Gomez-Chiarri. "Juvenile Oyster Disease, a (Manageable) Curse for Oyster Aquaculture (Abstract)." Journal of Shellfish Research. 28(3):713. August 2009.

McGreevy, Thomas J., Jr., Lisa Dabek, Marta Gomez-Chiarri and Thomas P. Husband. "Genetic Diversity in Captive and Wild Matschie's Tree Kangaroo (Dendrolagus matsheiti) From Huon Peninsula, Papua New Guinea, Based on mtDNA Control Region Sequences." Zoo Biology. 28(3):183-196. May 2009.

McMillan, Beverly, John A. Musick and Eva Schweikart. Haie. Oetinger. 2009.  64p.  (German)

McMillan, Beverly, John A. Musick and Eva Schweikart. Tiburones. Larousse. 2009.  64p.  (Spanish)

Medeiros, Erika F., Michael P. Phelps, Fernando D. Fuentes and Terence M. Bradley. "Overexpression of Follia Statin in Trout Stimulates Increased Muscling." American Journal of Physiology. Regulatory, Integrative and Comparative Physiology. 297(1):R235-R242. July 2009.

Megrey, Bernard A., Jonathan A. Hare, William T. Stockhausen, Are Dommasner, Haroldiosaeter, William Overholtz, Sarah Gaiches, Geor Skaret, Jannike Falk-Peterson, Jason L. Link and Kevin D. Friedland. "A Cross-Ecosystem Comparison of Spatial and Temporal Patterns of Covariation in the Recruitment of Functionally Analogous Fish Stocks."  Progress in Oceanography. 81(1-4):63-92. April 2009.

Mueter, Franz J., Cecilie Broms, Kenneth F. Drinkwater, Kevin D. Friedland, Jonathan A. Hare, George L. Hunt, Jr., Webjorn Melle and Maureen Taylor. "Ecosystem Responses to Recent Oceanographic Variability in High-Latitude Northern Hemisphere Ecosystems."  Progress in Oceanography. 81(1-4):93-110. April-June 2009.

Musick, John A.  SEE: Gedamke, Todd; Mansfield, Katherine L.; McMillan, Beverly; Portnoy, David S.; Romine, Jason G.

Nacci, Diane, Marina Huber, Denise Champlin, Saro Jayaraman, Sarah Cohen, Eric Gauger, Allison Fong and Marta Gomez-Chiarri. "Evolution of Tolerance to PCBs and Susceptibility to a Bacterial Pathogen (Vibrio harveyi) in Atlantic Killifish (Fundulus heteroclitus) From New Bedford (MA, USA) Harbor." Environmental Pollution. 157(3):857-864. 2009.

Palumbi, Stephen R., Paul A. Sandifer, J. David Allen, Michael W. Beck, Daphne G. Fautin, Michael J. Fogarty, Benjamin S. Halpern, Lewis S. Incze, Jo-Ann Leong, Elliott Norse, John J. Stachowicz and Diana H. Wall. "Managing for Ocean Biodiversity to Sustain Marine Ecosystem Services." Frontiers in Ecology and the Environment. 7(4):P204-211. May 2009.

Portnoy, David S., Jan R. McDowell, Camilla T. McCandless, John A. Musick and John E. Graves. "Effective Size Closely Approximates the Census Size in the Heavily Exploited Western Atlantic Population of the Sandbar Shark, Carcharhinus plumbeus." Conservation Genetics. 10(6):1697-1705. 2009.

Proestou, D. A., S. Salger, C. Vaughan and M. Gomez-Chiarri. "Form and Function of a Novel Metalloprotinease From the Eastern Oyster, Crassostrea virginica (Abstract)." Integrative and Comparative Biology A. 49(Suppl.1):E139. February 2009.

Proestou, D. A. and M. Gomez-Chiarri. "SNPS in a Matrix Metalloprateinase Gene in the Eastern Oyster, Crassostrea virginica (Abstract)." Journal of Shellfish Research. 28(3):721. August 2009.

Recksiek, Conrad W.  SEE: Appeldorn, R. S.

Reich, Danielle Ameen and Joseph T. DeAlteris. "A Simulation Study of the Effects of Spatially Complex Population Structure by the Gulf of Maine Atlantic Cod." North American Journal of Fisheries Management. 29(1):L116-126. February 2009.

Rheault, Robert. "Status and Trends in the East Coast Shellfish Culture Industry." Journal of Shellfish Research. 28(28):655. August 2009.

Rheault, Robert. "An update on the Accomplishments of the ECSGA and ECSRI." Journal of Shellfish Research. 28(28):655. August 2009.

Rice, Michael A.  SEE also: LaValley, Kenneth J.

Rice, Michael A. "Aquaculture in the Republic of Georgia." World Aquaculture. 26-29.  March 2009.

Rice, Michael A. and Dale Leavitt. Aquaculture Situation and Outlook Report 2009: Rhode Island. Northeastern Regional Aquaculture Center. (NRAC Publication No.110-2009) 2009.  8p.

Rice, Michael A. "Independent View: State Name Linked to Heritage." South County Independent. July 23, 2009.  p.A7.

Romine, Jason G., John A. Musick and George H. Burgess. "Demographic Analysis of the Dusky Shark, Carcharhinus obscuros, in the Northwest Atlantic Incorporating Hooking Mortality Estimates and Revised Reproductive Parameters." Environmental Biology of Fishes. 84(3):277-289. March 2009.

Schwartz, Malia L.  SEE also: Hansen, H.

Schwartz, M. L. and J. L. Norenburg. "Molecular Phylogenetics and Taxonomy of Pilidiophoran Nemerteans: Tackling a Can of Worms (Abstract)." Integrative and Comparative Biology. 49(Suppl.1):E153. 1 February 2009.

Shelton, J. and M. Gomez-Chiarri. "Diagnosis of Oyster Diseases Using Histological and Molecular Techniques (Abstract)." Journal of Shellfish Research. 28(3):728. August 2009.

Shields, J., K. Castro and J.Moss. "The '100 Lobster Project': A Cooperative Project on Epizootic Shell Disease in the American Lobster (Abstract)." Journal of Shellfish Research. 28(3):729. August 2009.

Smolowitz, Roxanne M.  SEE: DeFavier, J.; Spitsbergen, Jan M.

Spitsbergen, Jan M., Vicki S. Blazer, Paul R. Bowser, Keith C. Chen, Keith R. Cooper, Timothy K. Cooper, Salvatore Frasca, David B. Groman, Claudia M. Harper, Jerry M. (Mac) Law, Gary D. Marty, Roxanna M. Smolowitz, Judy St. Leger, Douglas Wolfe and Jeffrey L. Wolff. "Finfish and Aquatic Invertebrate Pathology Resource for Now and the Future." Comparative Biochemistry and Physiology. C - Toxicology & Pharmacology. 149(2):249-257. Sp Issue S1. March 2009.

Vaugh, C. F., D. A. Proestou and M. Gomez-Chiarri. "Host-Pathogen Interactions and Proteolytic Activity in Perkinsus marinus Challenged Eastern Oysters (Abstract)." Journal of Shellfish Research. 28(3):736. August 2009.

Wetherbee, Bradley M.  SEE: de Freitas, Renato Hagenis Ache.; Wood, Anthony D.

Wood, Abby Jane M., Jeremy S. Collie and Jonathan A. Hare. "A Comparison Between Warm-Water Fish Assemblages of Narragansett Bay And Those of Long Island Sound Waters." Fishery Bulletin. 107(1):89-100. January 2009.

Wood, Anthony D., Bradley M. Wetherbee, Francis Juanes, Nancy E. Kohler and Cheryl Wilga. "Recalculated Diet and Dairy Ration of the Shortfin Mako (Isurus oxyrincvhus), With a Focus on Quantifying Predation on Bluefish (Pomatomus saltratrix) in the Northeast Atlantic Ocean." Fishery Bulletin. 107(1):76-88. January 2009.

Worm, Boris, Ray Hilborn, Julia K. Baum, Trevor A. Branch, Jeremy S. Collie,  Christopher Costello, Michael J. Fogarty, Elizabeth A. Fulton, Jeffrey A. Hutchings, Simon Jennings, Olaf P. Jensen, Heike K. Lotze, Pamela M. Mace, Tim R. McClanahan, Coilin Mintu, Stephen R. Palumbi, Ana M. Parma, Daniel Ricard, Andrew A. Rosenberg, Reg Watson and Dick Zeller. "Rebuilding Global Fisheries." Science. 325(5978-585. July 31, 2009.

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