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University Libraries
Faculty Publications
Compiled by Margaret J. Keefe

Faculty Publications 2012

Natural Resources Science

Alan, Rebecca R. and Scott R. McWilliams. "Oxidative Stress, Circulating Antioxidants, and Dietary Preferences in Songbirds." Comparative Biochemistry and Physiology. Pt. B: Biochemistry sand Molecular Biology. 2012.

Amador, Jose A.  SEE also: Fetter, Joseph C.; Hull, Richard J.; McCray, J. E.; Torrens, Kathleen M.

Amador, Jose A. and Kathleen M. Torrens. "And in Conclusion."  IN: Torrens, Kathleen M. and Jose A. Amador, Editors. Taking It Online: A Multidisciplinary Journey. Information Age. 2012.  p.133-135.

Amador, J. A., C. V. Ramos, M. Alfaro and D. Sotomaor-Ramirez. "Impact of Coffee Management Practices on Earthworm Populations in Puerto Rico." Caribbean Journal of Science. 46(2-3):186-193. 2012.

Amador, Jose A. "Introduction to Soil Science: Transforming a Problem-Based Learning Course to Online."  IN: Torrens, Kathleen and Jose Amador, Editors. Taking It Online: A Multidisciplinary Journey. Information Age. 2011.  p.

Amador, Jose A. "Microbial Ecology of Tropical Forest Soils." Tropical Ecology. 53(2):183-184. May 2012.

Amador, Jose A. and Janet A. Atoyan. "Structure and Composition of Leachfield Bacterial Communities: Role of Soil Texture, Depth and Septic Tank Effluent Outputs." Water. (3)4:707-719.September  2012.

Amador, Jose A., Associate Editor. Tropical Ecology. Vol.53, 2012.

Ayebare, Samuel, David Moyer, Andrew J. Plumptre and Yeqiao Wang. "Remote Sensing for Biodiversity Conservation of the Albbertine Rift in Eastern Africa."  IN:  Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.  p.183-201.

Ballentine, Katherine, Rebecca Schneider, Peter Groffman and Johannes Lehmann. "Soil Properties and Vegetative Development in Four Restored Freshwater Depressional Wetlands." Soil Science Society of America Journal. 76(4):1482-1495. July 2012.

Bauchinger, Ulf and Scott R. McWilliams. "Tissue-Specific Mass Changes During Fasting: The Protein Turnover Hypothesis."  IN: McCue, Marshall. Comparative Physiology of Fasting, Starvation, and Food Limitation. Springer. 2012.  p.193-206.

Bettez, Neil D. and Peter M. Groffman. "Denitrification Potential in Stormwater Control Structures and Natural Riparian Zones in an Urban Landscape." Environmental Science & Technology. 46:10909-10917. 2012.

Blomberg, Erik J., Brian C. Teftt, J. Michael Reed and Scott R. McWilliams. "Evaluating Spatially Explicit Viability of a Declining Ruffled Grouse Population." Journal of Wildlife Management. 756(3):503-513. April 2012.

Burgin, Amy J., Julia G. Lazar, Peter M. Groffman, Arthur J. Gold and D. Q. Kellogg. "Balancing Nitrogen Retention Ecosystem Services and Greenhouse Gas Disservices at the Landscape Scale." Ecological Engineering. 2012.

Burgin, Amy J. and Peter M. Groffman. "Soil O-2 Controls Denitrification Rates and N20 Yield in a Riparian Wetland." Journal of Geophysical Research - Biogeosciences. 117:#G01010. February 1, 2012.

Carroll, Carlos, Daniel J. Rohif, Barry R. Noon and J. Michael Reed. "Scientific Integrity in Recovery Planning and Risk Assessment: Comment on Wilhere." Conservation Biology. 26(4):743-745. August 2012.

Chambers, Randolph M., Laura A. Meyerson and Kimberly L. Dibble. "Ecology of Phragmites australis and Responses to Tidal Restoration."    IN: Roman, Charles T. and David M. Burdick, Editors. Tidal Marsh Restoration; A Synthesis of Science and Management. Island Press. 2012.  p.81-96.

Cohen, Alan A., Lynn B. Martin, John C. Wingfield, Scott R. McWilliams and Jennifer A. Dunne. "Physiological Regulatory Networks: Ecological Roles and Evolutionary Constraints." Trends in Ecology & Evolution. 27(8):428-435. August 2012.

Dabek, Lisa.  SEE: McGreery, Thomas J.; Stabach, Jared A.; Travis, Erika.

Dalton, Tracey, Graham Forrester and Richard Pollnac. "Participation, Process Quality, and Performance of Marine Protected Areas in the Wider Caribbean." Environmental Management. 49(6):1224-1237. June 2012.

Dibble, Kimberly and Laura A. Meyerson. "Tidal Flushing Restores the Physiological Condition of Fish Residing in Degraded Salt Marshes." PLoS One. 7(9):e46161. September 27, 2012.

Duan, Shuiwang, Sujay S. Kavshal, Peter M. Groffman, L. E. Band and K. T. Bert. "Phosphorus Export Across an Urban to Rural Gradient in the Chesapeake Bay Watershed." Journal of Geophysical Research - Biogeosciences. 117:G01025. March 2012.

Dungan, Christopher F., Esther C. Peters and Joe Marcino. "Three Diseases of Softshell Clams, Mya Arena-Ria in Chesapeake Bay: 2000-2009 (Abstract)." Journal of Shellfish Research. 31(1):278. 2012.

Duran, Jorge, Jennifer L. Morse and Peter M. Groffman. "Comparison of In Situ Methods to Measure N Mineralization Roles in Forest Soils." Soil Biology and Biochemistry. 46:145-147. March 2012.

Eldridge, Mark D. B.  SEE: Frankenham, Greta J.; Frankenham, Richard; Lillie, Mette; Neaves, Linda E.; Pearse, Anne-Maree; Potter, Sally..

Fetter, Joseph C., Rebecca N. Brown, Josef H. Gorres, Chong Lee and Jose A. Amador. "Nitrate and Phosphate Leaching Under Turfgrass Fertilized With a Squid-Based Organic Fertilizer." Water, Air and Soil Pollution.223(4):1531-1541. May 2011.

Field, Cara L., Allison D. Tuttle, Inga F. Sidor, A. Nyacke, K. M. Deering, K. Gilbert-Marchetere, G. Risath, T. Spoon, J. Meegan, T. A. Romano, S. Frascon and J. L. Dunn. "Serologic Response in Bottlenose Delphins Tursiops truncatus Infected With Brucella sp Using a Dolphin-Specific Indirect ELISA." Diseases of Aquatic Organisms. 102(1):73-85. December 3, 2012.

Forrester, Graham E. SEE also: Dalton, Tracey.

Forrester, Graham E., Amy Maynard, Stephanie Schofield and Kerianne Taylor. "Evaluating Causes of Transplant Stress in Fragments of Acropora palmata Used for Coral Reef Restoration." Bulletin of Marine Science. 86(4):1099-1113. October 2012.

Frankenham, Greta J., Katherine A. Handasyde and Mark D. B. Eldridge. "Novel Insights into the Phylogenetic Relationships of the Endangered Marsupial Genus Potorus." Molecular Phylogenetics and Evolution. 64(3):592-602. September 2012.

Frankenham, Richard, Jonathan D. Ballou, Michele R. Dudash, Mark D. B. Eldridge, Charles B. Fenster, Robert C. Lacy, Joseph R. Mendelson III, Ingrid J. Porton, Katherine Ralls and Oliver A. Ryder. "Implications of Different Species Concepts for Conserving Biodiversity." Biological Conservation. 153:25-31. 2012.

Gold, Arthur J.  SEE: Burgin, Amy J.; Newcomer, T. A.; Pelletier, Marguerite C.

Golet, Francis G., Dennis H. A. Myshrali, Lawrence R. Oliver, Peter W. C. Paton and Brian C. Tefft. "Role of Science and Partnerships in Salt Marsh Restoration at the Galilee Bird Sanctuary, Narragansett, Rhode Island."    IN: Roman, Charles T. and David M. Burdick, Editors. Tidal Marsh Restoration; A Synthesis of Science and Management. Island Press. 2012.

Gorres, Josef H.  SEE also: Fetter, Joseph C.

Gorres, Josef H. and Ryan D. S. Meinichuk. "Asian Invasive Earthworms of the Genus Amynthas Kinberg in Vermont." Northeastern Naturalist. 10(2):313-334. 2012.

Groffman, Peter M.  SEE: Ballentine, Katherine; Bettez, Neil D.; Burgin, Amy J.; Duan, Shuiwang; Duran, Jorge; Harrison, Melanie D.; Heng, Bongghi; Newcomer, T. A.

Harrison, Melanie D., Peter M. Groffman, Paul M. Mayer and Sujay S. Kaushal. "Microbial Biomass and  Activity in Geomorphic Features in Forests and Urban Restored and Degraded Streams." Ecological Engineering. 35(1):1-10. January 2012.

Hong, Bongghi, Karin E. Limburg, Myrna H. Hall, Giorgos Mountrakis, Peter M. Groffman, Karla Hyde, Li Luo, Victoria R. Kelley and Seth J. Meyers. "An Integrated Monitoring/Modeling Framework for Assessing Human-Nature Interactions in Urbanizing Watersheds: Wappinger and Onondaga Creek Watersheds, New York, USA." Environmental Monitoring & Software. 32:1-15. June. 2012.

Hull, Richard J., Jose A. Amador, Haibo Liu and Joseph C. Fetter. "Do Organic Nitrogen Sources Leach Less Nitrate From Turf?" Turfgrass TRENDS. March 2012.  p.37-46.

Husband, Thomas P.  SEE: McGreery, Thomas J., Jr.

Karraker, Nancy E.  SEE: Sung, Yik-Hei.

Kegel, Alexander C., David T. Peck and J. Michael Reed. "No Evidence for Individual Assortment by Temperment Relative to Patch Area or Patch Openness in the Bobolink." Condor. 114(1):212-218. 2012.

Kegel, Alexander C., Carolyn M. Bauer, Christine R. Lattin, L. M. Romero and J. Michael Reed. "Testing the Role of Patch Openness as a Casual Mechanism for Apparent Area Sensitivity in a Grassland Specialist." Oecologia. 169(2):407-418. June 2012.

Kellogg, Dorothy Q.  SEE: Burgin, Amy J.

Keyel, Allexander C., Carolyn M. Baier, Christine R. Lattin, L. Michael Romero and J. Michael Reed. "Testing the Role of Patch Openness as a Causal Mechanism for Apparent Area Sensitivity in a Grassland Specialist." Oecologia. 169(2):407-418. June 2012.

Ladin, Z. S., P. M. Castelli, S. R. McWilliams and C. K. Williams. "Erratum: Time Energy Budgets and Food Use of Atlantic Brant Across Their Wintering Range." Journal of Wildlife Management. 76(3):658. April 2012.

Lille, Mette, Rachel E. Woodward, Claire E. Sanderson, Mark D. B. Eldridge and Katherin Belov. "Diversity at the Major Histocompatibility Complex Class II in the Platypus, Ornithorynchus anatinus." Journal of Heredity. 103(4):467-478. August 2012.

Lojka, Bohdan, D. Preiner, P. Van Damme, A. Rollo and J. Banout. "Use of the Amazonian Tree Species Inga edulis for Soil Regeneration and Weed Control." Journal of Tropical Forest Science. 24(1):87-101. January 2012.

McCray, J. E., M. Geza, K. S. Lowe, M. B. Tucholke, A. Wunssch, S. Roberts, J. Drewes, J. Amador, J. Atoyan, D. Kalen, G. Loomis, T. B. Boving and D. Radcliff. "Qualitative Tools to Determine the Expected Performance of Wastewater Soil Treatment Units - Guidance Manual, Toolkit User's Guide and Visual Graphic Tools." Water International Online. 2011.

McDonald, Micael E. and John F. Paul. "Response to Comment on 'Timing of Increased Autistic Disorder Cumulative Incidence' (Letter)." Environmental Science & Technology. 46:1950-1951. 2012.

McGreevy, Thomas J., Jr,. Lisa Dabek and Thomas Husband. "Tree Kanagroo Molecular Systematics Based on Partial Cytochrome b Sequences: Are Matschie's Tree Kangaroo (Dendrolagus matschiei) and Goodfellow's Tree Kangaroo (D-goodfellow buergersi) Sister Taxa?" Australian Mammology. 34(1):18-28. 2012.

McWilliams, Scott R.  SEE: Alan, Rebecca R.;  Bauchinger, Ulf; Blomberg, Erik J.; Cohen, Alan A.; Ladin, Zachary; Munoz-Garcia, A.; Nebel, Silke; Ricker, M. C.; Winiarski, Kristopher J.

Meegan, Jenny, J. Lawrence Dunn, Stephanie K. Venn-Watson, G,. R. Smith, I. Sidor, E. D. jensen, W. B. Van Bonn, R. Pugh, I. Ficht, L. G. Adams, K. Nielson and Tracy A. Romano. "Systemic Mycosis in a California Sea Lion (Zalophus Californianus) With Detection of Cystofilobasidiales DNA." Journal of Zoo and Wildlife Medicine. 43(1):144-

Meyerson, Laura A.  SEE also: Chambers, Randolph M.; Dibble, Kimberly; Miranda, R.

Meyerson, Laura, Associate Board. Biological Invasions. 2012.

Meyerson, L. A., C. Lambertini, M. K. McCormick and D. F. Whigham. "Hybridization of Common Reed in North America? The Answer Is Blowing in the Wind." AoB Plants. 2012.

Miranda, R., E. Reynolds, L. Ray, A. Justus, V. S. Knopik, J. McGeary and L. Meyerson. "Preliminary Evidence for a Gene-Environment Interaction in Predicting Alcohol Use Disorders in Adolescents." Alcoholism: Clinical and Experimental Research. 2012.

Munoz-Garcia, Agusti, Sarah E. Aamidor, Marshall D. McCue, Scott R. McWilliams and Berry Pinshaw. "Allocation of Endogenous and Dietary Protein in the Reconstitution of the Gastrointestinal Tract in Migratory Blackcaps at Stopover Sites." Journal of Experimental Biology. 215(Pt.7):1069-1075. April 1, 2012.

Nagy, Christopher M. and Robert F. Rockwell. "Identification of Individual Eastern Screech Owls Megascops asio Via Vocalization Analysis." Bioacoustics. 21(2):127-140. June 2012.

Nagy, Christopher M., Kyle Bardwell, Robert F. Rockwell, R. Christie and M. Weekly. "Validation of a Citizen Science-Based Model of SIte Occupance for Eastern Screech Owls With Systematic Data in Suburban New York." Northeastern Naturalist. 17(6):143-158. 2012.

Neaves, Linda E., Kyall R. Zenger, Robert I. T. Prince and Mark D. B. Eldridge. "Impact of Pleisocene Aridity Oscillations on the Population History of a Widespread, Vagile Australian Mammal, Macropus fuliginous." Journal of Biogeography. 39(8):1545-1563. August 2012.

Nebel, Silke, Ulf Bauchinger, Deborah M. Buehler, Lillie A. Langlois, Michelle Boyles, Alexander R. Gerson, Edwin R. Price, Scott  R. McWilliams and Christopher G. Guglielmo. "Constitutive Immune Function in European Starlings, Sturnis vulgaris, Is Decreased Immediately After an Endurance Flight in a Wind Tunnel." Journal of Experimental Biology. 215(2):272-278. January 2012.

Neckles, Hilary A., Blaine S. Kopp. Bradley J. Peterson and Penelope S. Pooler. "Integrating Scales of Seagrass Monitoring to Meet Conservation Needs." Estuaries and Coasts. 35(1):23-46. January 2012.

Newcomer, T. A., S. S. Kaushal, P. M. Mayer, A. R. Sheilds, E. A. Canvel, P. M. Groffman and A. J. Gold. "Influence of Natural and Novel Organic Carbon Sources on Denitrification in Forest, Degraded, Urban, and Restored Streams." Ecological Monographs. 82(4):449-466. November 2012.

Norman, Stephanie A., Caroline E. C. Goertz, Kathy A. Burek, L. T. Quakenbush, L. A. Cornik, T. A. Romano,  T. Spoon, W. Miller, L:. A. Beckalt and R. C. Hobbs. "Seasonal Hematology and Serum Chemistry of Wild Beluga Whales (Delphinapterus leucas) in Bristol Bay, Alaska, USA." Journal of Wildlife Diseases. 48(1):21-32. January 2012.

Osenkowski, Jason E.  SEE also: Paton, Peter W. C.

Osenkowski, Jason E., Peter W. C. Paton and Douglas Krauss. "Using Long-Term Constant-Effort Banding Data to Monitor Population Trends of Migratory Birds: A 33-Year Assessment of Adjacent Coastal Waters." Condor. 114(3):470-481. August 2012.

Paton, Peter W. C.  SEE also: Golet, Francis C.; Osenkowski, Jason E.; Shumchenia, Emily J.

Paul, John F.  SEE: McDonald, Michael E.

Pearse, Anne-Maree, Kate Swift, Pamela Hodson, Bobby Hua, Hamish McCallum, Stephen Pyecroft, Robyn Taylor, Mark D. B. Eldridge and Katherine Belov." Evolution in a Transmissable Cancer: A Study of the Chromosomal Changes in Devil Facial Tumor (DFT) as It Spreads Through the Wild Tasmanian Devil Population." Cancer Genetics. 205(3):101-102. March 2012.

Pelletier, Margeurite C., Arthur J. Gold, Liliana Gonzalez and Candace Oviatt. "Application of Multiple Index Development Approaches to Benthic Invertebrate Data From Virginia Biogeographic Province, USA." Ecological Indicators. 23:176-188. December 2012.

Peters, Esther C.  SEE: Dungan, Christopher F.

Potter, Sally, Mark D. B. Eldridge, Steven J. B. Cooper, Justyna Z. Paplinska and David A. Taggart. "Habitat Connectivity, More Than Species' Biology, Influences Genetic Differentiation in a Habitat Specialist, the Short-Eared Rock Wallaby (Petrogale brachyotis)." Conservation Genetics. 13(4):937-952. August 2012.

Potter, Sally, Mark D. B. Eldridge, David A. Taggart and Steven J. B. Cooper. "Multiple Biogeographical Barriers Identified Across the Monsoon Tropics of Northern Australia: Pylogeograophic Analysis of the Brachyotis Group of Rock-Wallabies." Molecular Ecology. 21(9):2254-2269. May 2012.

Rabenhorst, M. C. and M. H. Stolt. "Field Estimations of Soil Organic Carbon." Soil Science Society of America Journal. 76(4):1478-1481. July 2012.

Rabenhorst, M. C. and M. H. Stolt. "Subaqueous Soils: Pedogenesis, Mapping, and Applications."  IN: Hydropedology. 2012.  p.173-204.

Reed, J. Michael.  SEE also:  Blomberg, Erik J.; Carroll, C.; Keyel, Alexander G.; Tavernia, Brian G.

Reed, J. Michael, David W. Desrochers, Eric A. Vanderwerf and J. Michael  Scott. "Long-Term Persistence of Hawaii's Endangered Avifauna Through Conservation-Reliant Management." Bioscience. 62(10):881- December 2012.

Ricker, M. C., S. W. Donohue, M. H. Stolt and M. S. Zavada. "Development and Application of Multi-Proxy Indices of Land Use Change for Riparian Soils in Southern  New England, USA." Ecological Applications. 22(2):487-501. March 2012.

Rockwell, Robert F.  SEE: Karraker, Nancy E.; Nagy, Christopher M.; Winiarski, Kristopher J.

Romano, Tracy A.  SEE: Field, Cara L.; Meegan, Jenny; Norman, Stephanie A.; Spoon, Tracey R.

Saltonstall, Kristin and Graham D. Bonnett. "Fire Promotes Growth and Reproduction of Saccharum spontaneum (L.) in Panama." Biological Invasions. 14(12):2479-2488. 2012.

Saltonstall, Kristin and Carla Lambertini. "The Value of Repetitive Sequences in Chloroplast DNA for Phylogeographic Inference: A Comment on Vachon & Freeland 2011." Molecular Ecology Resources. 12:581-585. 2012.

Shumchenia, Emily J., Sarah L. Smith, Jennifer McCann, Michelle Carnevale, Grover Fugate, Robert D. Kenney, John W. King, Peter Paton, Malia Schwartz, Malcolm Spaulding and Kristopher J. Winiarksi, "An Adaptive Framework for Selecting Environmental Monitoring Protocols to Support Ocean Renewable Energy Development." Scientific World Journal. #150685. 2012.

Spoon, Tracey R. and Tracy A. Romano. "Neuroimmunological Response of Beluga Whales (Delphinapterus leucas) to Translocation and  a Novel Social Environment." Brain Behavior and Immunity. 26(1):122-131. January 2012.

Stabach, Jared A., Lisa Dabek, Rigel Jensen, Gabriel Porolak and Yeqiao Wang. "Utilization of Remote Sensing Technologies for Matshie's Tree Kangaroo Conservation and Planning in Papua New Guinea."  IN: Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.  p.159-181.

Stolt, Mark H.  SEE: Rabenhorst, M. C.;  Ricker, M. C.

Sung, Yik-Hei, Nancy E. Karraker and Billy C. H. Hau. "Terrestrial Herpetofaunal Assemblages in Secondary Forests and Exotic Lophostemon confertus Plantations in South China." Forest Ecology and Management. 270:71-72. April 15, 2012.

Tao, Wenfang, Qingri Chang and Yeqiao Wang. "Land-Cover Change and Conservation of the Protected Ancient City Park in Xi'an, Northwestern China."  IN: Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.   p.131-143.

Tavernia, Brian G. and J. Michael Reed. "The Impact of Exotic Purple Loosestrife (Lythrum salicaria) on Wetand Bird Abundances." American Midland Naturalist. 168(2):352-363. October 2012.

Tefft, Brian C.  SEE: Blomberg, Erik J.; Golet, Francis C.

Torrens, Kathleen M. and Jose A. Amador, Editors. Taking It Online: A Multidisciplinary Journey. Information Age. 2012.  138p.

Travis, Erika K., Patricia Watson and Lisa Dabek. "Health Assessment of Free-Ranging and Captive Matschie's Tree Kangaroos (Dendrolagus matschiel) in Papua New Guinea." Journal of Zoology and Wildlife Medicine. 43(1):1-9. 2012.

Wang, Yeqiao.  SEE also: Mayebare, Samuel; Stabach, Jared A.; Tao, Wengfang; Xu, Jiawei.

Wang, Yeqiao. "Land-Cover Change and Conservation of Protected Lands in Urban and Suburban Settings."  IN: Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.   p.111-130.

Wang, Yeqiao, Yuyu Zhou, Jian Yang and Hong S. He. "Remote Sensing Assessment of Wildfire Impact and Simulation Modeling of Short-Term Post-Fire Vegetation Recovery Within the Dixie National Forest."  IN: Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.   p.281-202.

Wang, Yeqiao, Editor.  Remote Sensing of Protected Lands. CRC Press.  2012.  582p.

Wang, Yeqiao. "Remote Sensing of Protected Lands: An Overview."   IN: Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.   p.1-25.

Winiarski, Kristopher J., Scott R. McWilliams and Robert F. Rockwell. "Rapid Environmental Degradation in a Subarctic Ecosystem Influences Resource Use of a Keystone Avian Herbivore." Journal of Animal Ecology. 81(5):1132-1142. September 2012.

Xu, Jiawei, Yu Liang and Yeqiao Wang. "Integration of Remote Sensing and In Situ Observations for Examining Effects of Past Volcanic Eruptions on Forests of the Changbai Mountain Nature Reserve in Northeast China."  IN: Wang, Yeqiao. Remote Sensing of Protected Lands. CRC Press.  2012.   p.233-279.

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